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Snakemake workflow: megadudes-evaluation
This is the template for a new Snakemake workflow. Replace this text with a comprehensive description covering the purpose an...

Robust Optogenetic Inhibition with Red-light-sensitive Anion-conducting Channelrh
This repository hosts the bioinformatic analysis worklow used in Oppermann et al (2023) Robust Optogenetic Inhibition with ...


Single-Cell RNAseq Data Quality Control Workflow using Scanpy
Take an anndata file, and perform basic QC with scanpy. Produces a filtered AnnData object.

Dose-Response Curve Fitting Workflow for Cell-Based Assay Data with KNIME HCS Extension
This workflow can be used to fit dose-response curves from normalised cell-based assay data (%confluence) using the KNIME HCS...

Bio 470 project 2022. Bulk RNA scripts
This workflow performs a differential expression analysis using STAR and DESeq2 . It performs a wide range of quality...
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