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hyperpanel
Hypermutated Tumor Mutational Signature Detection and Visualization Pipeline
This pipeline is designed to detect and visualise Mutational Signatures in Hypermutated Tumors Designed and Edited by : Moham...
snakemake_ont_consensus_build
A mini snakemake pipeline to batch construct consensus sequences from long nanopore amplicons w/ medaka for a set of samples
A mini snakemake pipeline for batch constructing consensus sequences from long nanopore amplicons with medaka for a set of sa...
genomics-recombination-and-selection-analysis
Genomics - Recombination and selection analysis
This workflow employs a recombination detection algorithm (GARD) developed by Kosakovsky Pond et al. and implemented in the h...
gnomad_rocksdb
Variant Allele Frequency Lookup from gnomAD using RocksDB
Fast look up interface allel frequency of variants from gnomad with rocksdb. conda install -c conda-forge python-rocksdb pip ...

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