Genomics - Read pre-processing without downloading from SRA

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Preprocessing of raw SARS-CoV-2 reads. This workflow contains an alternate starting point to avoid the data to be downloaded from the NCBI SRA. More info can be found at https://covid19.galaxyproject.org/genomics/

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Created: 1yr ago

Updated: 1yr ago

Maitainers: public

URL: https://usegalaxy.eu/workflows/trs_import?trs_server=workflowhub.eu&run_form=true&trs_id=4&trs_version=1

Name: genomics-read-pre-processing-without-downloading-f

Version: Version 1

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License: MIT License

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BAM SAM fastp FastQC Galaxy Minimap2 MultiQC NanoPlot SAMtools WorkflowHub Genomics

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https://workflowhub.eu/workflows/4

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