All Published Workflows

1 workflows that have been reviewed and published

bggm — Show Details View Workflow

Code used for the manuscript 'Network reconstruction for trans acting genetic loci using multi-omics data and prior information' by Hawe et al., 2022 in Genome Medicine

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The snakemake workflow first defines a set of trans-QTL hotspots from available QTL results (i.e. genetic variants with 5...

FDb.InfiniumMethylation.hg19 Homo.sapiens illuminaHumanv3.db GenomicRanges graph Magma patcHwork pheatmap qvalue Snakemake BDgraph cowplot data.table doParallel dplyr fdrtool ggplot2 gridExtra igraph knitr magrittr Matrix microbenchmark plsgenomics reshape2 scales tidyverse

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