All Published Workflows
1 workflows that have been reviewed and published
MPRA GWAS Builder: snakemake workflow
Robin Meyers (@robinmeyers)
If you simply want to use this workflow, download and extract the latest release .
If ...
BSgenome.Hsapiens.NCBI.GRCh38
BSgenome.Hsapiens.UCSC.hg19
SNPlocs.Hsapiens.dbSNP144.GRCh37
TxDb.Hsapiens.UCSC.hg19.knownGene
TxDb.Hsapiens.UCSC.hg38.knownGene
ucsc-liftover
Biostrings
Greedy algorithm for Set Cover problem
haploR
LDlinkR
plyranges
rtracklayer
Snakemake
VariantAnnotation
cowplot
doMC
ggplot2
magrittr
tidyverse