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drug_susceptibility_collection
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A snakemake pipeline to generate the transcriptomic signatures of drug susceptibility used in beyondcell
public

public

The purpose of this repository and the snakemake pipeline associated with it is to regenerate the whole collection of transcr...
hgu219.db Sample annotation Transcriptome assembly Report biomaRt ArrayExpress edgeR fgsea GSEABase limma oligo oligoClasses Pandas RSEM Snakemake dplyr openxlsx tidyverse Drug development
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