All Published Workflows

Data index Analysis Report FastANI MMseqs NanoPlot SAMtools seqkit Snakemake Molecular evolution

Data index Whole genome methylation analysis Report kneaddata Bowtie 2 HUMAnN2 MetaPhlAn Snakemake Whole genome sequencing

JSON Data index Analysis Report Snakemake metagenomics

Data index Variant calling genetic variants MSI MSIsensor Snakemake microsatellite

Data index Analysis Report plink2 tabix ucsc-liftover BCFtools BEDTools Pandas pLink Quant Snakemake broom coloc cowplot data.table dplyr fitdistrplus ggh4x ggplot2 ggrepel kableExtra knitr MASS showtext tidyr numpy Quality affairs

BAM Data index Indel detection genetic variants Bowtie 2 SAMtools VarScan RNA-Seq