All Published Workflows
6 workflows that have been reviewed and published
Repository to store the analysis of the paper on phage evolution.
A Snakemake workflow for Phage directed evolution analysis .
Biobakery Data Processing Workflow
A biobakery workflow pipeline for Whole Metagenome Shotgun (wmgx) data processing implemented using Snakemake rather than AnA...
Tools and utilities for making use of mastiff
"That's a beautiful collection of public data you have here, it would
be a shame if someone made it searchable." -- paraphra...
Detect replication slippage variants at microsatellite regions
This is a Snakemake workflow for microsatellite instability detection in bam files, powered by MSISensor . Each tool ...
This is a repository holding code to obtain preliminary results for the VR Starting Grant 2023.
This Snakemake workflow contains all the code necessary to reproduce the preliminary results from my application to VR Starti...
Genomic variants - SNPs and INDELs detection using VARSCAN2.
Author: AMBARISH KUMAR [email protected] ; [email protected]
This is a proposed standard operating procedure for ...