All Published Workflows
4 workflows that have been reviewed and published
First complet version of the workflow with snakemake
First complete version of the BGNN image segmentation workflow managed using snakemake. The image segmentation workflow is ma...
Validate a tool against IDR data: Load Image with labels from IDR, re-analyze using Cellpose
IDR is based on OMERO and thus all what we show in this notebook can be easily adjusted for use against another OMERO server,...
Apis-wings-EU: A workflow for morphometric identification of honey bees from Europe
We present an R script that describes the workflow for analysing honey bee (Apis mellifera) wing shape. It is based on a larg...
De novo digitisation
De novo digitisation is the process of creating digital records of physical items that have never been digitised before. This...