All Published Workflows

2 workflows that have been reviewed and published

snakemake_anvio
Show Details View Workflow
Anvi'o Analysis Workflow Using Snakemake
public

public

snakemake rules for running anvio This Snakefile will run a basic anvi'o analysis of a set of assemblies and a set of sam...
Sequence assembly Analysis Data Anvio Bowtie 2 Centrifuge SAMtools Snakemake Sequence analysis Sequence assembly
Free
12
momofy-module-for-integrative-mobilome-prediction
Show Details View Workflow
MoMofy: Module for integrative Mobilome prediction
public

public

Module for integrative Mobilome prediction Bacteria can acquire genetic material through horizontal gene transfer, allowing t...
FASTQ Sequence assembly Genome assembly Annotation track isescan Diamond Integron Finder metaprokka Nextflow metagenomics
Free
16