All Published Workflows

3 workflows that have been reviewed and published

genomic-variants-snps-and-indels-detection-using-1
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Genomic variants - SNPs and INDELs detection using GATK4 spark based tools.
public

public

Author: AMBARISH KUMAR er.ambarish@gmail.com & ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for...
BAM Genome index Indel detection genetic variants gatk Bowtie 2 Picard SAMtools RNA-Seq
Free
12
genomic-variants-snps-and-indels-detection-using-v
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Genomic variants - SNPs and INDELs detection using VARSCAN2.
public

public

Author: AMBARISH KUMAR er.ambarish@gmail.com ; ambari73_sit@jnu.ac.in This is a proposed standard operating procedure for ...
BAM Data index Indel detection genetic variants Bowtie 2 SAMtools VarScan RNA-Seq
Free
9
variant-calling-pipeline-gatk4
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Variant Calling Pipeline using GATK4
public

public

Identifying genomic variants using next-generation sequencing data, such as single nucleotide polymorphisms (SNPs) and DNA in...
Indel detection SNP annotation Variant calling gatk BWA SAMtools DNA
Free
11