All Published Workflows

3 workflows that have been reviewed and published

vgp-hifi-phased-assembly-with-hifiasm-and-hic-da-1
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VGP HiFi phased assembly with hifiasm and HiC data workflow
public

public

Performs Long Read assembly using PacBio data and Hifiasm. Part of VGP assembly pipeline. This workflow generate a phased assembly.
Database ID Scaffolding Sequence assembly report Galaxy long-read-tools WorkflowHub Sequence assembly
Free
vgp-hybrid-scaffolding-with-hic-data
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VGP hybrid scaffolding with HiC data
public

public

Performs scaffolding using HiC Data. Part of VGP assembly pipeline. The scaffolding can be performed on long read assembly co...
Database ID Scaffolding Sequence assembly report Galaxy HIFI long-read-tools WorkflowHub Sequence assembly
Free
vgp-hifi-phased-assembly-with-hifiasm-and-hic-data
Show Details View Workflow
VGP HiFi phased assembly with hifiasm and HiC data
public

public

Performs Long Read assembly using PacBio data and Hifiasm. Part of VGP assembly pipeline. This workflow generate a phased assembly.
Database ID Scaffolding Sequence assembly report Galaxy long-read-tools WorkflowHub Sequence assembly
Free