All Published Workflows

2 workflows that have been reviewed and published

mega-non-model-wgs-snakeflow
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Mega non-model WGS Snakeflow
public

public

There are two main changes: The genomics databases are now created directly from the gvcf sections. As a consequence, it ...
raw sequence reads Sequence clustering Score gatk rust-bio-tools snakemake-wrapper-utils BCFtools BWA FastQC gatk_realigner_target_creator MultiQC Pandas Picard SAMtools Snakemake Trimmomatic Variant Effect Predictor (VEP) tidyverse common matplotlib numpy seaborn vcfstats Genomics
Free
72
apis-wings-eu-a-workflow-for-morphometric-identifi
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Apis-wings-EU: A workflow for morphometric identification of honey bees from Europe
public

public

We present an R script that describes the workflow for analysing honey bee (Apis mellifera) wing shape. It is based on a larg...
Image Analysis Score Consensus geomorph geosphere ggforce ggplot2 mgcViz Morpho phangorn rnaturalearth shapes viridis Biodiversity
Free
25